The TM4 Software Development Team expresses sincere thanks for the contributions of those listed below.

Contributor Affiliation Contribution
Nirmal Bhagabati, John Braisted, Vasily Sharov, Wei Liang, Chun-Hua Wan, and Alexander I. Saeed The Institute for Genomic Research / Pathogen Functional Genomics Resource Center System design, module development and implementation, project coordination, documentation, optimization, usability assurance, user support, and Linear Expression Map (LEM) module development.
Valentin Antonescu, Harold Gomez, Kristina Holton, Eleanor Howe, Sarita Nair, John Quackenbush, Dan Schlauch, Raktim Sinha, Razvan Sultana, Weidong Wang Dana-Farber Cancer Institute All changes in Version 4.3 - 4.6.
Vu Chu, Annie Liu, Roger Bumgarner University of Washington Agilent data loader, USC, TEASE
Raktim Sinha Dana Farber Cancer Institute Added aCGH type data loaders, aCGH visualizing modules and aCGH analysis algorithms functionality to MeV based on a published open source tool & article(Adam A. Margolin et al, Bioinformatics 2005)
Alexander Sturn, Zlatko Trajanoski Institute of Biomedical Engineering, Graz University of Technology Initial system architecture and viewer design, initial module development (HCL, KMC, SOM, PCA, SVM)
Tony Burnett European Bioinformatics Institute, Hinxton, UK MAGE-TAB Parser.
Mark Snuffin, Aleksey Rezantsev, Dennis Popov, Alex Ryltsov, Edward Kostukovich, Igor Borisovsky DataNaut, Inc. System architecture, module architecture, parallel processing system, primary module development (RN, TRN)
Tom Chittenden Dana-Farber Cancer Institute, Boston, MA, USA. nEASE algorithm development.
Stu Golub, Zaigang Liu, Jane Ruan, Minhas Siddiqui Syntek Systems Corporation, Inc. Primary module development (CAST, FOM, GSH, GDM)
Wei Liang The Institute for Genomic Research Normalization algorithm development, TM4 website maintenance
Jerry Li, Vasily Sharov, Joe White, Mathangi Thiagarajan, Tracey Currier, Eleanor Howe The Institute for Genomic Research Additional development, software testing, documentation, support
Patrick Cahan, Tim McCaffrey The George Washington University Affymetrix data loader and filters, Affymetrix loader rework, gene submission capability for the LOLA cluster repository
Todd Peterson National Center for Genome Resources GeneX-Lite to MeV connectivity
Luke Somers Fox Chase Cancer Center QTC algorithm optimization and bug fix
Jim Johnson, Ernest Retzel Center for Computational Genomics and Bioinformatics, University of Minnesota Java WebStart configuration, scripts and consultation to support using ANT technologies for MeV development
Glynn Dennis, Douglas Hosack, Richard Lempicki, Wei Gao National Institute of Allergy and Infectious Disease, NIH, Laboratory of Immunopathogenesis and Bioinformatics. EASEOpenSource Java package to support EASE development and helpful consultation during EASE integration and development.
Eric Albert Independent Development Implementation of BrowserLauncher.java, utility to launch default web browser from within MeV
Sally Gaddis University of Texas, MD Anderson Cancer Center Report and basic testing of Java3D support for mev 3D viewers on the Mac platform.
Stephen C. Harris FDA, National Center for Toxicological Research T-test bug identification, and suggestion for improvement of adjusted Bonferroni correction.
Daniel Tenenbaum, Paul Shannon, Nitin Baliga Institute for Systems Biology, Seattle, WA Gaggle implementation, webstart improvements, general software engineering help.
David Waring Fred Hutchinson Cancer Research Center, Seattle, WA Servlet-based file downloading support, webstart improvements.