Programas

1. Consulta bibliográfica e Videoaulas

 

Normalização de trabalhos acadêmicos da UFSC: http://portal.bu.ufsc.br/normas-e-procedimentos/normalizacao/

Video Lecture MIT (Massachusetts Institute of Technology): https://www.youtube.com/watch?v=TnpCMgtDPgk&list=PLF83B8D8C87426E44

Word Applied – Scientific English Tool: http://www.wordapplied.com/about.html

Aulas Estatística Youtube: https://www.youtube.com/watch?v=nnKhFBkHFF8

Scopia Desktop (Videoconferência): http://www.reannz.co.nz/services/scopia-desktop-installation

Pubmed: http://www.ncbi.nlm.nih.gov/pubmed

ScienceDirect: http://www.sciencedirect.com/

Web of Science: https://apps.webofknowledge.com/

SciELO: http://www.scielo.org/php/index.php

Scopus: http://www.scopus.com/

Crossref: http://www.crossref.org/guestquery/

PubCrawler: http://pubcrawler.gen.tcd.ie/

Periódicos CAPES: http://www-periodicos-capes-gov-br.ez67.periodicos.capes.gov.br/index.php?option=com_phome

Mendeley: http://www.mendeley.com/dashboard/

Zotero: https://www.zotero.org/

EndNote: http://endnote.com/

Convert Scanned PDF to WORD: http://www.onlineocr.net/

VideoScribe (editor de videos): http://www.videoscribe.co/

Animaker (editor de videos): https://www.animaker.com/

TeleLab: http://telelab.aids.gov.br/

Draw Venn Diagrams: http://bioinformatics.psb.ugent.be/webtools/Venn/

 

2. Bancos de dados

 

GenBank NCBI: http://www.ncbi.nlm.nih.gov/nucleotide/

UniProt – The Universal Protein Resource: http://www.uniprot.org/

PDB – Protein Data Bank: http://www.rcsb.org/pdb/home/home.do

PDBe – Protein Data Bank in Europe: http://www.ebi.ac.uk/pdbe/

EMBL-EBI – European Bioinformatics Institute: http://www.ebi.ac.uk/services

DDBJ – DNA Database of Japan: http://www.ddbj.nig.ac.jp

BRENDA – Comprehensive Enzyme Information System: http://www.brenda-enzymes.org/index.php

Gene Ontology Consortium: http://geneontology.org/

GO – Gene Expression Omnibus: http://www.ncbi.nlm.nih.gov/geo/

GeneCards: http://www.genecards.org/

APD – The Antimicrobial Database: http://aps.unmc.edu/AP/main.php

Pfam Database: http://pfam.xfam.org/

AquaFirst: http://www.sigenae.org/aquafirst/

 

3. Bioinformática

 

FastPCR: download

Bioedit: http://www.mbio.ncsu.edu/bioedit/bioedit.html

BLAST: http://blast.ncbi.nlm.nih.gov/Blast.cgi

blastn: http://blast.ncbi.nlm.nih.gov/blast/Blast.cgi?PROGRAM=blastn&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome

blastp: https://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastp&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome

blastx: http://blast.ncbi.nlm.nih.gov/blast/Blast.cgi?PROGRAM=blastx&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome

tblastn: https://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=tblastn&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome

tblastx: https://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=tblastx&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome

ORF Finder: http://www.ncbi.nlm.nih.gov/gorf/gorf.html

OrthoDB: http://orthodb.org/

CDD – Conserved Domains Database: http://www.ncbi.nlm.nih.gov/Structure/cdd/cdd.shtml

SMART – Simple Modular Architecture Research Tool: http://smart.embl-heidelberg.de

BLAST2GO: https://www.blast2go.com/

KEGG – Kyoto Encyclopedia of Genes and Genomes: http://www.genome.jp/kegg/

KEGG Mapper: http://www.genome.jp/kegg/mapper.html

KAAS – KEGG Automatic Annotation Server: http://www.genome.jp/tools/kaas/

BioCarta Pathways: http://www.biocarta.com/genes/allpathways.asp

Venny: http://bioinfogp.cnb.csic.es/tools/venny/

DAVID: http://david.abcc.ncifcrf.gov/

ClustalW2: http://www.ebi.ac.uk/Tools/msa/clustalw2/

MAFFT: http://mafft.cbrc.jp/alignment/software/

MEGA – Molecular Evolutionary Genetics Analysis: http://www.megasoftware.net/

OMIC Tools: http://omictools.com/

SignalP: http://www.cbs.dtu.dk/services/SignalP/

ProP: http://www.cbs.dtu.dk/services/ProP/

PeptideCutter: http://web.expasy.org/peptide_cutter/

Expasy Proteomic Tools: http://www.expasy.org/tools/

Expasy Translate Tool: http://web.expasy.org/translate/

Expasy ProtParam Tool: http://web.expasy.org/protparam/

NetPhos: http://www.cbs.dtu.dk/services/NetPhos/

TMpred Server: http://www.ch.embnet.org/software/TMPRED_form.html

InterPro – Protein sequence analysis and classification: http://www.ebi.ac.uk/interpro/

Primer3: http://simgene.com/Primer3

OligoAnalyzer: https://www.idtdna.com/calc/analyzer

GenScript Primer Design: http://www.genscript.com/cgi-bin/tools/primer_genscript.cgi

SciencePrimer (calculator): http://scienceprimer.com/tools

Custom RNAi Design Tool (IDT): https://www.idtdna.com/Scitools/Applications/RNAi/RNAi.aspx?source=menu

Molarity Calculator: http://www.graphpad.com/quickcalcs/molarityform.cfm

PCR Mix calculator: http://www.mutationdiscovery.com/md/MD.com/screens/optimase/MasterMixCalculator.jsp?action=none

Tm calculator (Thermo Scientific): http://www.thermoscientificbio.com/webtools/tmc/

NEBioCalculator: http://nebiocalculator.neb.com/#!/

GelAnalyzer: http://www.gelanalyzer.com/index.html

NEBcutter V2.0: http://nc2.neb.com/NEBcutter2/

Restriction Mapper: http://www.restrictionmapper.org/

Enzyme Finder: https://www.neb.com/tools-and-resources/interactive-tools/enzyme-finder

StepOnePlus Software: https://www.lifetechnologies.com/br/en/home/technical-resources/software-downloads/StepOne-and-StepOnePlus-Real-Time-PCR-System.html

MeV – Multiple Array Viewer: download

NormFinder: download

RefGenes: http://refgenes.org/rg/

RefFinder: http://150.216.56.64/referencegene.php?type=reference

Programa R (estatística): http://cran.r-project.org/bin/windows/base/